Workflow: Analyze Evoked Action Potential Data — analysis_evoked

Working example of how to use the functions within this package to create an analysis pipeline.

Usage

analysis_evoked_ap(
  data_folder_path,
  data_parameters,
  histo_bin_size = 1,
  histo_window_size = 50,
  histo_one_event_per_bin = FALSE
)

Arguments

data_folder_path: path of data folder containing *.ASC files
data_parameters: path of csv file with project parameters
histo_bin_size: integer, histogram bin size. Wrapper for create_histogram_df(), defaults to 1 ms.
histo_window_size: integer, histogram window size. Wrapper for create_histogram_df(), defaults to 50 ms.
histo_one_event_per_bin: boolean, wrapper for create_histogram_df() arg one_event_per_bin, defaults to FALSE.

Value

tibble of aggregated data

Details

This particular workflow is used to analyze the spike jitter, probability, and rate of action potentials generated by externally stimulating synaptic inputs onto the recorded neuron.

Note

This workflow has hard-coded values, yet is intended to serve as a reference point.

Examples

if (FALSE) {
data_path <- paste(getwd(), "data-raw/evoked_ap", sep = "/")
data_folder <- paste(data_path, "data", sep = "/")
data_parameters <- paste(data_path, "evoked_ap_parameters.csv", sep = "/")

data_collection <- analysis_evoked_ap(
  data_folder_path = data_folder,
  data_parameters = data_parameters
)
}